Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926728.1_cds_XP_016474703.1_66703
CDS Infomation

[gene=LOC107796444] [db_xref=GeneID:107796444] [protein=alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like] [protein_id=XP_016474703.1] [location=complement(20795..22402)] [gbkey=CDS]
Sequence

ATGGAGTGTGCTCTTGCATGTTCTGCTTCAGCGACAATTGCACTAGTCCGCTGCCGCCAA
ATGCGATGGGGAAAGACACGTTCACCTAAGTTACCCATGATTTGGAGCAGTTCGTGGTGT
TCTGGTAGCTCAAAGAGGAATAGATCACTGCGCACTGTTGCCTTGAGCGCCACCGCAGGA
TTCGGAAGTACCATGGAAGCTCCTGCTGCAGCTGATGCTCCACGTCTTAATTATATTTGG
CCTGATAACAAGCGGCCAAGGGTCTGCATAGTAGGTGGTGGATTTGGAGGTCTTTATACA
GCATTGAGGTTAGAATCACTTGTTTGGCCTGATGGCAAGAAACCACAGGTAGTCCTCATA
GACCAGTCAGAACGTTTCGTTTTTAAGCCAATGTTGTATGAACTTCTCTCTGGAGAAGTT
GAGACATGGGAAATTGCTCCACAGTTCTCAGACTTGCTTGCCAATACAGATGTGCGGTTC
CTCAAAGACAGGGTAAAATGCCTATATCCATGTGACCATTTAGGAACTAATGCACCTACA
GCAGGGACTGTTCATCTCGAAAGCGGTCTCCTAATAGAATATGACTGGTTGGTCCTTGCT
ATAGGAGCTGAGGCCAAACTTGATATCGTACCAGGTGCCGCAGACTATGCCTTGCCATTT
TATACCCTAGATGATGCTCTTAGGGTTGATAAAAAGCTAAAGGAATTAGAGCGCAAGAAC
TTTGGTAAGGACTCTGCAGTACGAGTAGCAGTGGTTGGATGTGGTTATGGTGGAGTTGAG
TTAGCTGCCACGATATCAGAAAGGTTGAAAGAAAAGGGTATTGTACAAGCAATTAATGTT
GAAAAGACAGTCTTGCCAAATGCTCCGGCAGGAAATAGGGAAGCAGCACTAAAAGTACTT
TTGTCTAGGAAAGTTCAACTTCTACTTGGTTATTTTGTCCGATGCATAAAAAAGGAAGTT
GAGTCTCAGACCTCTGATGCTGAATCTAAGAGCATGGACTCAGCAGCTGATCATTCTGAA
AGCATAATACTTGAATTGCAGCCTGCTGAAAGGGGCTTAGAGGGTCAGATCATAACGGCA
GATATAGTTTTATGGACTATTGGATCTAAGCCACTACTTCCTGAGTTGGAACCTAGTGAT
AAACCTTACGACATTCCTCTGAACGCTAGGGGACAAGCAGAAACTGATGAAACTCTTCGT
GTCAAGGGTCATCCTCGTATATTTGCTGTTGGTGACTCTTCTGCATTAAGGGACGAAAAT
GGGAAGGTGCTACCGGCTACTGCACAAGTTGCTTTCCAGCAAGCAGATTTTGCTGGTTGG
AATTTGTGGGCCGCAATTAATGACCGTCCACTGTTGCCTTTTAGGTATCAAAATTTAGGT
GAGATGATGACTCTTGGCAGGCATGACGCTGCTGTTTCACCAAGCTTCACCGATGGGCTG
ACCTTAGAAGGTTTTGTTGGTCATACTGCAAGAAAAGTAGCCTATTTGATCAGATTACCA
ACTGATCAGCACCGCGTGAAAGTAGGAATCAGTTGGTTACTGAAGTCCACTGTGGATTCG
GTTGCAACAGTACAGACAATGCTCGCGAAAGCTCAATCAGGATCTTAG

Peptide Sequence

PEP ID

XP_016474703.1
PEP Infomation

PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MECALACSASATIALVRCRQMRWGKTRSPKLPMIWSSSWCSGSSKRNRSLRTVALSATAG
FGSTMEAPAAADAPRLNYIWPDNKRPRVCIVGGGFGGLYTALRLESLVWPDGKKPQVVLI
DQSERFVFKPMLYELLSGEVETWEIAPQFSDLLANTDVRFLKDRVKCLYPCDHLGTNAPT
AGTVHLESGLLIEYDWLVLAIGAEAKLDIVPGAADYALPFYTLDDALRVDKKLKELERKN
FGKDSAVRVAVVGCGYGGVELAATISERLKEKGIVQAINVEKTVLPNAPAGNREAALKVL
LSRKVQLLLGYFVRCIKKEVESQTSDAESKSMDSAADHSESIILELQPAERGLEGQIITA
DIVLWTIGSKPLLPELEPSDKPYDIPLNARGQAETDETLRVKGHPRIFAVGDSSALRDEN
GKVLPATAQVAFQQADFAGWNLWAAINDRPLLPFRYQNLGEMMTLGRHDAAVSPSFTDGL
TLEGFVGHTARKVAYLIRLPTDQHRVKVGISWLLKSTVDSVATVQTMLAKAQSGS

Transcript Sequence

Gene sequence data has not been registered.